MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,736
rRNA: 15
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,715
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000036.1
MBF0814788.1
Genome Viewer
NA
AA
239/79
239-1
E domain-containing protein
SEQF5041|JADGLJ010000011.1
MBF0814704.1
Genome Viewer
NA
AA
1488/496
3041-1554
lysine--tRNA ligase
SEQF5041|JADGLJ010000011.1
MBF0814705.1
Genome Viewer
NA
AA
480/160
3543-3064
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
SEQF5041|JADGLJ010000011.1
MBF0814706.1
Genome Viewer
NA
AA
366/122
3908-3543
dihydroneopterin aldolase
SEQF5041|JADGLJ010000011.1
MBF0814707.1
Genome Viewer
NA
AA
804/268
4689-3886
dihydropteroate synthase
SEQF5041|JADGLJ010000011.1
MBF0814708.1
Genome Viewer
NA
AA
933/311
5849-4917
cysteine synthase A
SEQF5041|JADGLJ010000011.1
MBF0814709.1
Genome Viewer
NA
AA
882/294
6877-5996
Hsp33 family molecular chaperone HslO
SEQF5041|JADGLJ010000011.1
MBF0814710.1
Genome Viewer
NA
AA
2067/689
9180-7114
ATP-dependent zinc metalloprotease FtsH
SEQF5041|JADGLJ010000011.1
MBF0814711.1
Genome Viewer
NA
AA
540/180
10016-9477
hypoxanthine phosphoribosyltransferase
SEQF5041|JADGLJ010000011.1
MBF0814712.1
Genome Viewer
NA
AA
1284/428
11304-10021
tRNA lysidine(34) synthetase TilS
SEQF5041|JADGLJ010000011.1
MBF0814713.1
Genome Viewer
NA
AA
399/133
11910-11512
RNA-binding protein S1
SEQF5041|JADGLJ010000011.1
MBF0814714.1
Genome Viewer
NA
AA
399/133
12409-12011
septum formation initiator family protein
SEQF5041|JADGLJ010000011.1
MBF0814715.1
Genome Viewer
NA
AA
264/88
12694-12431
RNA-binding S4 domain-containing protein
SEQF5041|JADGLJ010000011.1
MBF0814716.1
Genome Viewer
NA
AA
1194/398
13884-12691
nucleotide pyrophosphohydrolase
SEQF5041|JADGLJ010000011.1
MBF0814717.1
Genome Viewer
NA
AA
1554/518
15437-13884
polysaccharide biosynthesis protein
SEQF5041|JADGLJ010000011.1
MBF0814718.1
Genome Viewer
NA
AA
3513/1171
18939-15427
transcription-repair coupling factor
SEQF5041|JADGLJ010000011.1
MBF0814719.1
Genome Viewer
NA
AA
573/191
19508-18936
aminoacyl-tRNA hydrolase
SEQF5041|JADGLJ010000011.1
MBF0814720.1
Genome Viewer
NA
AA
657/219
20375-19719
50S ribosomal protein L25/general stress protein Ctc
SEQF5041|JADGLJ010000011.1
MBF0814721.1
Genome Viewer
NA
AA
966/322
21479-20514
ribose-phosphate diphosphokinase
SEQF5041|JADGLJ010000011.1
MBF0814722.1
Genome Viewer
NA
AA
1356/452
22987-21632
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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